Dr. Max Alekseyev's home page

	Dr. Max Alekseyev
	Contact Info	Research	Teaching	Publications	Resume

Dr. Max Alekseyev

Associate Professor
Department of Biostatistics & Bioinformatics, Department of Mathematics, and Computational Biology Institute

Director
Computational Biology Lab

E-mail: maxal@gwu.edu
Phone: (571) 553-0259
Office: Science & Engineering Hall (SEH), Office 7560

Mailing address:

The George Washington University
Department of Biostatistics & Bioinformatics
800 22nd Street NW, Office 7560
Washington, DC 20052

Research Interests:
Computational Molecular Biology / Bioinformatics, Comparative Genomics, Graph Theory, Combinatorics, Discrete Algorithms, Cryptography.

Brief Biography:

Ph.D. in computer science, University of California, San Diego, CA, 2007
M.S. (summa cum laude) in mathematics, Lobachevsky State University of Nizhni Novgorod, Russia, 1999
B.S. (summa cum laude) in mathematics, Lobachevsky State University of Nizhni Novgorod, Russia, 1997

Recent publications (see Publications page for the complete list):

S. Aganezov, P. Avdeyev, N. Alexeev, Y. Rong, and M. A. Alekseyev. "Orienting Ordered Scaffolds: Complexity and Algorithms", 2020. (submitted) arXiv:1911.11190
P. Avdeyev, N. Alexeev, Y. Rong, and M. A. Alekseyev. "A Unified ILP Framework for Core Ancestral Genome Reconstruction Problems". Bioinformatics 36:10 (2020), 2993–3003. doi:10.1093/bioinformatics/btaa100
R. M. Waterhouse, S. Aganezov, Y. Anselmetti, J. Lee, L. Ruzzante, M. J. M. F. Reijnders, R. Feron, S. Bèrard, P. George, M. W. Hahn, P. I. Howell, M. Kamali, S. Koren, D. Lawson, G. Maslen, A. Peery, A. M. Phillippy, M. V. Sharakhova, E. Tannier, M. F. Unger, S. V. Zhang, M. A. Alekseyev, N. J. Besansky, C. Chauve, S. J. Emrich, and I. V. Sharakhov. "Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies". BMC Biology 18 (2020), 1. doi:10.1186/s12915-019-0728-3 bioRxiv:10.1101/434670
M. A. Alekseyev. "On partitions into squares of distinct integers whose reciprocals sum to 1". In: J. Beineke, J. Rosenhouse (eds.) The Mathematics of Various Entertaining Subjects: Research in Recreational Math, Volume 3, Princeton University Press, 2019, pp. 213–221. ISBN 978-0-691-18257-5. doi:10.1515/9780691194417-016 doi:10.2307/j.ctvd58spj.18 arXiv:1801.05928
P. Avdeyev, M. Atamanova, and M. A. Alekseyev. "A Uniform Theory of Adequate Subgraphs for the Genome Median, Halving, and Aliquoting Problems". Proceedings of the 6^th International Conference on Algorithms for Computational Biology (AlCoB 2019). Lecture Notes in Computer Science 11488 (2019), 97–111. doi:10.1007/978-3-030-18174-1_7
P. Avdeyev, S. Jiang, and M. A. Alekseyev. "Linearization of Median Genomes under the Double-Cut-and-Join-Indel Model". Evolutionary Bioinformatics 15 (2019), 1–12. doi:10.1177/1176934318820534