Dr. Max Alekseyev's home page

	Dr. Max Alekseyev
	Contact Info	Research	Teaching	Publications	Resume

Dr. Max Alekseyev

Associate Professor
Department of Biostatistics & Bioinformatics, Department of Mathematics, and Computational Biology Institute

Director
Computational Biology Lab

E-mail: maxal@gwu.edu
Phone: (571) 553-0259
Office: Science & Engineering Hall (SEH), Office 7560

Mailing address:

The George Washington University
Department of Biostatistics & Bioinformatics
800 22nd Street NW, Office 7560
Washington, DC 20052

Research Interests:
Computational Molecular Biology / Bioinformatics, Comparative Genomics, Graph Theory, Combinatorics, Discrete Algorithms, Cryptography.

Brief Biography:

Ph.D. in computer science, University of California, San Diego, CA, 2007
M.S. (summa cum laude) in mathematics, Lobachevsky State University of Nizhni Novgorod, Russia, 1999
B.S. (summa cum laude) in mathematics, Lobachevsky State University of Nizhni Novgorod, Russia, 1997

Recent publications (see Publications page for the complete list):

S. Aganezov, P. Avdeyev, N. Alexeev, Y. Rong, and M. A. Alekseyev. "Orienting Ordered Scaffolds: Complexity and Algorithms", 2021. (submitted) arXiv:1911.11190
A. Zamyatin, P. Avdeyev, J. Liang, A. Sharma, C. Chen, V. Lukyanchikova, N. Alexeev, Z. Tu, M. A. Alekseyev, I. V. Sharakhov. "Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis". GigaScience 10:3 (2021), giab017. doi:10.1093/gigascience/giab017 bioRxiv:10.1101/2020.09.29.318477
G. Bebis, M. Alekseyev, H. Cho, J. Gevertz, M. Rodriguez Martinez (Eds.) “Mathematical and Computational Oncology”. Proceedings of the Second International Symposium (ISMCO), October 8–10, 2020, San Diego, CA, USA. doi:10.1007/978-3-030-64511-3
P. Avdeyev and M. A. Alekseyev. "Linearization of Ancestral Genomes with Duplicated Genes". Proceedings of the 11^th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB), 2020, Article 53. doi:10.1145/3388440.3412484
M. A. Alekseyev, J. M. Grau, and A. Oller-Marcen. "Computing solutions to the congruence 1ⁿ + 2ⁿ + ... + nⁿ ≡ p (mod n)". Discrete Applied Mathematics 286 (2020), 3-9. doi:10.1016/j.dam.2018.05.022 arXiv:1602.02407
P. Avdeyev, N. Alexeev, Y. Rong, and M. A. Alekseyev. "A Unified ILP Framework for Core Ancestral Genome Reconstruction Problems". Bioinformatics 36:10 (2020), 2993–3003. doi:10.1093/bioinformatics/btaa100
R. M. Waterhouse, S. Aganezov, Y. Anselmetti, J. Lee, L. Ruzzante, M. J. M. F. Reijnders, R. Feron, S. Bèrard, P. George, M. W. Hahn, P. I. Howell, M. Kamali, S. Koren, D. Lawson, G. Maslen, A. Peery, A. M. Phillippy, M. V. Sharakhova, E. Tannier, M. F. Unger, S. V. Zhang, M. A. Alekseyev, N. J. Besansky, C. Chauve, S. J. Emrich, and I. V. Sharakhov. "Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies". BMC Biology 18 (2020), 1. doi:10.1186/s12915-019-0728-3 bioRxiv:10.1101/434670